The Matrix Meets Open Access
If you walk into an 91重口 Tech physics lab, you might hear references to something called Neo.
No, the talk isn鈥檛 about the high-flying hero of the sci-fi trilogy The Matrix. It鈥檚 about an innovative pair of data-analysis tools鈥擷-ray photoelectron spectroscopy (XPS) Neo and X-ray emission spectroscopy (XES) Neo鈥攄esigned by 91重口 Tech Ph.D. student Alaina Humiston (Ph.D. PHYS 6th Year) that have the potential to transform how scientists analyze complex materials data.
鈥淭he program name actually comes from the character that you know in The Matrix,鈥 says Alaina. 鈥淲hen you run the code, it looks like The Matrix running across your screen. That鈥檚 how it got the name.鈥
The software builds on a long-running project that includes extended X-ray absorption fine structure Neo and nanoindentation (Nano-Neo), but Alaina鈥檚 work is helping it evolve into something far more powerful鈥攁nd, critically, accessible鈥攖o scientists around the world. The core problem that their work addresses is a significant problem in X-ray photoelectron spectroscopy: bad data fits. These bad data fits are incorrect or poorly constructed models of XPS information that result from choosing the wrong parameters, peak shapes, backgrounds, or constraints, as well as noisy or cropped data. These errors often result in unreliable or misleading conclusions.
鈥淭his data has been shown in the literature to have a large amount of inexperienced users publishing really bad data fits,鈥 says Alaina. 鈥淭here is a big need for a software that has more knowledge about the data you鈥檙e fitting.鈥
That鈥檚 where Neo comes in. By embedding expert knowledge directly into its algorithm, the software helps steer users away from common mistakes. The result is an analysis that鈥檚 more accurate, more reliable, and more scientifically meaningful.
The idea is simple: build a tool that catches common mistakes before they happen.
鈥淗aving an algorithm that already has this information built into it can help steer these fits away from some really big mistakes,鈥 adds Alaina.
This project hasn鈥檛 gone unnoticed. Alaina鈥檚 work on Neo has garnered recognition, winning a poster award at the ICESS-16 conference this summer and has been featured on the Journal of Electron Spectroscopy and Related Phenomena website.
Alaina and their research group have already publicly released XES Neo on GitHub鈥攁 platform where developers can share their code, among other things鈥攚ith XPS Neo soon to follow.
The next steps for Neo are even more ambitious.
With funding from Los Alamos National Laboratory, Alaina is helping develop the algorithm further so it can handle extremely challenging datasets鈥攕ome of which involve notoriously complex materials such as plutonium. Part of that effort includes building an online library of high-quality reference data that Neo can learn from.
鈥淲e want this algorithm to be able to fit very difficult data,鈥 says Alaina. 鈥淲e鈥檙e striving for an algorithm that learns based on information it has.鈥
More than anything, Alaina wants this work to remain open to all鈥攁ccessible, transparent, and freely usable. That鈥檚 why they鈥檙e making it publicly available to anyone who needs it.
鈥淚t鈥檚 a technique that a lot of people are using; it鈥檚 become a lot more popular over just the past couple of decades,鈥 says Alaina. 鈥淗aving an algorithm like this out there for others to use鈥攊t鈥檚 not behind any paywall鈥攊s something that I really enjoy. I believe that information should be available for everyone.鈥
As Neo continues to evolve, so does the impact of Alaina鈥檚 work. By pairing technical expertise with a commitment to open access, Alaina is helping to open the door to better science, broader collaboration, and discoveries that reach far beyond the walls of any single lab.